AUTODETECT "ID *\nSQ*" #Global settings: KEYWIDTH 5 FILETAG "EBI" BEGIN "ID*" MATCH "ID *" SRT "ID * *=*1" WRITE "name" MATCH "ID *" SRT "ID * *=*1" TAG "EBI" WRITE "id" MATCH "ID *" SRT "*;*;*; * BP.=*4" TAG "EBI" WRITE "db_nuc" MATCH "AC *" ACI "extract_words("0123456789",4.0)" WRITE "acc" MATCH "AC *" TAG "EBI" ACI "extract_words("0123456789",4.0)" WRITE "db_acc" MATCH "SV *" TAG "EBI" ACI "extract_words("0123456789",4.0)" WRITE "version" MATCH "DT *" SRT "DT *=*" TAG "EBI" APPEND "date" MATCH "DE *" SRT "DE *=*:;=" TAG "EBI" APPEND "description" MATCH "KW *" SRT "KW *=*" TAG "EBI" APPEND "keywd" MATCH "OS *" SRT "OS *=*:* * *=*1 *2" WRITE "full_name" MATCH "OS *" SRT "OS *=*" TAG "EBI" WRITE "db_name" MATCH "OC *" SRT "OC *=*" TAG "EBI" APPEND "tax" MATCH "OG *" SRT "OG *=*" TAG "EBI" APPEND "organelle" MATCH "RN *" SRT "RN *=*:[=:]=" SETVAR x TAG "EBI" APPEND "num_bib" MATCH "RP *" SRT "RP *=*:*=[$x]\: *" TAG "EBI" APPEND "gene_pos" MATCH "RC *" SRT "RC *=*:*=[$x]\: *" TAG "EB$x" APPEND "auth_comm" MATCH "RX MEDLINE*" SRT "*MEDLINE*=*2:;=: =:.=:*=[$x]\: *" TAG "EBI" APPEND "medline" MATCH "RX PUBMED*" SRT "*PUBMED*=*2:;=: =:.=:*=[$x]\: *" TAG "EBI" APPEND "pubmed" MATCH "RG *" SRT "*\;=*1:RG *=[$x]\: *" TAG "EBI" APPEND "refgrp" #MATCH "RA *" # SRT "*\;=*1:RA *=*" # TAG "EBI" # APPEND "author_$x" MATCH "RA *" SRT "*\;=*1:RA *=[$x]\: *" TAG "EBI" APPEND "author" MATCH "RT *" SRT ";=:\"=:?*=?1*1:RT *=[$x]\: *" # ACI "caps" TAG "EBI" APPEND "title" MATCH "RL *)." SRT "RL *=*" TAG "EBI" APPEND "journal" MATCH "RL *Submitted*" SRT "RL *=*" TAG "EBI" APPEND "submiss" MATCH "RL (er)*" SRT "RL (er)*=*" TAG "EBI" APPEND "e_pub" #MATCH "RL *" # SRT "RL *=*:*).=:Submitt*=" # TAG "EBI" # APPEND "auth_submiss" MATCH "DR *" SRT "DR *; *=*1\: *2:;=" TAG "EBI" APPEND "db_ref" MATCH "CC *" SRT "CC *=*" TAG "EBI" APPEND "auth_com2" MATCH "FT source*" SRT "*=src" SETVAR z MATCH "FT *mol_type*" SRT "*mol_type*=*2:\==:\"=:" TAG "EBI" APPEND "mol_type" MATCH "FT *citation*" SRT "*citation*=*2:\"=:\==:*=($z)\: *" TAG "EBI" APPEND "biblio" MATCH "FT *cell_line*" SRT "*cell_line*=*2:\"=:\==" TAG "EBI" APPEND "cell_line" MATCH "FT *cell_type*" SRT "*cell_type*=*2:\"=:\==" TAG "EBI" APPEND "cell_type" MATCH "FT *clone*" SRT "*clone*=*2:\"=:\==" TAG "EBI" APPEND "clone" MATCH "FT *cultivar*" SRT "*cultivar*=*2:\"=:\==" TAG "EBI" APPEND "cultivar" MATCH "FT *db_xref=*" SRT "*db_xref*=*2:\"=:\==:*=($z)\ *" TAG "EBI" APPEND "db_ref" MATCH "FT *lab_host=*" SRT "*lab_host*=*2:\"=:\==" TAG "EBI" APPEND "host" MATCH "FT *isolate=*" SRT "*isolate*=*2:\"=:\==" TAG "EBI" APPEND "isolate" MATCH "FT *strain*" SRT "*/strain*=*2:\"=:\==" TAG "EBI" APPEND "strain" MATCH "FT *isolation_source*" SRT "*/isolation_source*=*2:\"=:\==" TAG "EBI" APPEND "isol_src" MATCH "FT *source*/map*" SRT "*/map*=*2:\"=:\==" TAG "EBI" APPEND "map" MATCH "FT *source*/note*" SRT "*/note*=*2:\"=:\==:*=($z)\: *" TAG "EBI" APPEND "note" MATCH "FT *organelle*" SRT "*/organelle*=*2:\"=:\==" TAG "EBI" APPEND "organelle" MATCH "FT *plasmid*" SRT "*/plasmid*=*2:\"=:\==" TAG "EBI" APPEND "plasmid" MATCH "FT *serotype*" SRT "*/serotype*=*2:\"=:\==" TAG "EBI" APPEND "serotype" MATCH "FT *serovar*" SRT "*/serovar*=*2:\"=:\==" TAG "EBI" APPEND "serovar" MATCH "FT *sub_species*" SRT "*/sub_species*=*2:\"=:\==" TAG "EBI" APPEND "subspec" MATCH "FT *specimen_voucher*" SRT "*/specimen_voucher*=*2:\"=:\==" TAG "EBI" APPEND "voucher" MATCH "FT *specific_host*" SRT "*/specific_host*=*2:\"=:\==" TAG "EBI" APPEND "host" MATCH "FT *tissue_type*" SRT "*/tissue_type*=*2:\"=:\==" TAG "EBI" APPEND "tissue" MATCH "FT *variety*" SRT "*/variety*=*2:\"=:\==" TAG "EBI" APPEND "variety" #MATCH "FT *source*/*" # SRT "*/\=\"*\"=*2" # TAG "EBI" # APPEND "" MATCH "FT CDS*" SRT "<=:>=:*CDS*=*2: =" SETVAR z TAG "EBI" APPEND "cds_pos" #MATCH "FT*" # SRT "CDS=:*=[$z]\: *" # APPEND "testwl" MATCH "FT *allele* SRT "*allele*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "allele" MATCH "FT *citation* SRT "*citation*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "citation" MATCH "FT *codon_start* SRT "*codon_start*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "codon_start" MATCH "*CDS*" SRT "*db_xref*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "db_ref2" MATCH "FT *function* SRT "*function*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "function" MATCH "FT *gene* SRT "*gene*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "gene" #MATCH "FT *map* # SRT "*map*=*2:\"=:\==:*=[$z]\: *" # TAG "EBI" # APPEND "map" #MATCH "FT *note* # SRT "*note*=*2:\"=:\==:*=[$z]\: *" # TAG "EBI" # APPEND "note" MATCH "FT *EC_number* SRT "*EC_number*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "EC_number" MATCH "FT *product*" SRT "*product*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "product" MATCH "FT *operon*" SRT "*operon*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "operon" MATCH "FT *protein_id" SRT "*protein_id*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "prot_id" MATCH "FT *translation*" SRT "*translation*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "translation" MATCH "FT *transl_table*" SRT "*transl_table*=*2:\"=:\==:*=[$z]\: *" TAG "EBI" APPEND "transl_table" MATCH "FT *" SRT "FT *=*" APPEND "ebi_comment" SEQUENCEAFTER "SQ*" SEQUENCESRT "*Check*..*=*3" SEQUENCEACI "remove("0123456789 /")" SEQUENCEEND "//" CREATE_ACC_FROM_SEQUENCE # DONT_GEN_NAMES END "//"